Cord Blood Stem Cells Used Successfully to Treat 4 Year Old

When Steve and Rosa Barney?s daughter Isabella, now 4, was born, the couple decided to take a preventative medical measure that felt both mysterious and hopeful: They banked their baby girl?s cord blood with a private company, thinking that its rich stem cells could be there to help treat an unforeseeable issue, such as childhood leukemia. They also considered that it might someday benefit their older son, who suffers from a motor speech disorder called childhood apraxia.

They wound up using it sooner than they thought, and in a way that totally amazed them ? for Isabella?s own apraxia, discovered at 18 months and largely turned around when she was 3, after a 15-minute, cutting-edge procedure, in which a their daughter had an infusion of her own stored cord blood. ?It was like her being born again,? says Steve, of Queens, New York, who notes that he and his wife were stunned by the results.

Cord blood banking is where the stem cells are removed from an newborn?s umbilical cord once it?s been clamped and cut. Those cells are then sent to a lab and frozen as a type of insurance, in case one day, if needed, they can be thawed and used to treat certain health conditions and diseases.

?We got on the ball a bit quicker with her,? Steve explains, having her tested and utilizing early intervention services when she was very young. But she went to preschool at 2 1/2 with ?very limited vocabulary,? he says, and, after preschool, had only about 15 words that could be understood (typically, a 3-year-old would have about 500 words at his or her disposal). Her parents dove into research about using stored cord-blood for treating apraxia, and found a cutting-edge program at Duke University, where stem-cell pioneer Dr. Joanne Kurtzberg had already overseen a handful of similar, successful treatments ? including for a 5-year-old with cerebral palsy, Grace Rosewood, who experienced vast improvements after receiving infusions of her stored cord blood as part of a clinical trial.

?We were still hesitant,? Steve recalls about taking the chance. ?One thing they don?t tell you with banking is that it?s basically a one-time use.? Still, after speaking with another parent about having success with the treatment at Duke, he says, ?it was a no-brainer for me.?

Then came the elaborate process of looking into whether or not Isabella was a good candidate. ?We look at the cord blood, as some banks get a higher quality than others, and we need make sure we have enough cells, with a minimum amount of information, plus good sterility,? says Kurtzberg ? who also runs a public cord-blood bank and Carolina Cord Blood Bank, accepting donations from moms who deliver healthy babies but who have no risks, and is the president of the new Cord Blood Association, created to harmonize education, regulation, and advocacy around the issue of cord-blood banking.

Regarding the decision of whether to bank a baby?s cord-blood privately or publicly, Kurtzberg explains, ?A mom has to know she?s really giving up her rights to the cord blood with a public donation. If it happens to be there, she can have it. There?s no risk, no cost, and is the truly altruistic choice.? Publicly donated cord blood is available to anyone, and doesn?t necessarily have to be a full match; it?s particularly useful for both children and adults who have conditions that cannot be treated with one?s own cord blood ? including some cancers, sickle cell, and metabolic disease.

Isabella received her treatment after receiving a full workup, including tests to make sure there was no genetic disease present. She checked out, and the cord blood was shipped to Duke.

The family was there for three days with their daughter, but the whole infusion process, given through an IV, took just 10 to 15 minutes, Steve says. As Kurtzberg explains, ?The child gets an IV ? sometimes the veins in the feet are easiest to access ? and they get Benadryl and a steroid to prevent reactions.? Then they infuse the cells, which have been washed in a lab, through a drip, similar to how a blood transfusion works. Duke typically does about three to four infusions a week, though that number will soon go up to 10, she says.

?After they put a needle in her foot, she slept for over an hour, and woke up smelling like a can of creamed corn, from the chemicals,? Steve recalls. ?It was the most beautiful smell you could smell.? Isabella?s speech abilities were immediately improved, he adds ? ?like night and day.? She?s now up to about 60 words, he adds, and though is still relying on extra speech-therapy services, ?the biggest thing is that she picks up new words without telling us, and that catches us by surprise all the time.?

The cost of the procedure, Kurtzberg says, averages $7,500 to $10,000, and is only sometimes covered by insurance. In the Barneys? case, the family?s insurance covered about 40 percent. ?It was very worth it,? Steve says ? especially the cord blood banking part. ?I suggest it to everybody, because you just never know.?

Eating Trans Fats Worsens Memory

High consumption of trans fats such as found in foods containing hydrogenated oils is linked to worse memory according to a study among working-age men, according to research presented at the American Heart Association’s Scientific Sessions 2014.

In a recent study of approximately 1,000 healthy men, those who consumed the most trans fats showed notably worse performance on a word memory test. The strength of the association remained even after taking into consideration things like age, education, ethnicity and depression.

“Trans fats were most strongly linked to worse memory, in young and middle-aged men, during their working and career-building years,” said Beatrice A. Golomb, M.D., Ph.D., lead author and professor of medicine at the University of California-San Diego. “From a health standpoint, trans fat consumption has been linked to higher body weight, more aggression and other health problems. As I tell patients, while trans fats increase the shelf life of foods, they reduce the shelf life of people.”

Golomb and her coauthor studied adults including men age 20 or older and postmenopausal women. Participants completed a dietary questionnaire, from which the researchers estimated participants’ trans fat consumption. To assess memory, researchers presented participants with a series of 104 cards showing words. Participants had to state whether each word was new or a word duplicated from a prior card.

?Among men under age 45, those who ate more trans fats showed notably worse performance on the word memory test. The strength of the association remained even after taking into consideration things like age, education, ethnicity and mood.

?Each additional gram a day of trans fats consumed was associated with an estimated 0.76 fewer words correctly recalled.

?For those eating the highest amounts of trans fats, this translated to an estimated 11 fewer words (a more than 10 percent reduction in words remembered), compared to adults who ate the least trans fat. (The average number of words correctly recalled was 86.)

“Foods have different effects on oxidative stress and cell energy,” Golomb said. In a previous study, we found chocolate, which is rich in antioxidants and positively impacts cell energy, is linked to better word memory in young to middle-aged adults. In this study, we looked at whether trans fats, which are prooxidant and linked adversely to cell energy, might show the opposite effect. And they did.”

Industrial trans fats are artificially produced to turn liquid oils into solids at room temperature and extend food shelf life. They can be found in margarines, fast foods, baked goods, snack foods, frozen pizza, coffee creamers and some refrigerated doughs. The Food and Drug Administration is taking further steps to reduce the amount of artificial trans fats in the U.S. food supply.

Analyses in younger women are needed to determine whether effects extend to this group, Golomb said.

Moderate Coffee Drinking Lowers Risk of Overall Mortality

In a 10-year U.S. study, people who drank coffee regularly were less likely to die of many causes, including heart disease and diabetes, than those who didn’t drink coffee at all.

The more coffee study participants consumed, the lower their risk of dying, and decaf drinkers showed a similar pattern.

“Coffee contains numerous biologically active compounds, including phenolic acids, potassium, and caffeine,” said lead author Dr. Erikka Loftfield of the National Cancer Institute in Rockville, Maryland.

Many studies have found that coffee consumption is associated with lower risk of overall and heart-related mortality, Loftfield told Reuters Health by email.

The researchers used data from a previous study on 90,317 adults without cancer or history of cardiovascular disease who were followed from 1998 through 2009. They had reported their coffee intake, along with other dietary and health details, at the start of the study.

By 2009, about 8,700 people had died. After accounting for other factors like smoking, the researchers found that coffee drinkers were less likely to have died during the study than nondrinkers.

The risk of death was lowest for those who drank four to five cups of coffee per day. A similar association was seen among drinkers of decaffeinated coffee as well, according to the results in American Journal of Epidemiology.

Coffee drinkers had a reduced risk of death from heart disease, chronic respiratory diseases, diabetes, pneumonia and influenza and suicide, but not cancer, the researchers found.

“Although coffee drinking has also been inversely associated with incidence of certain cancers, like liver, in epidemiological studies, we did not observe an association between coffee and overall cancer mortality,” Loftfield said. “This may be because coffee reduces mortality risk for some cancers but not others.”

People who consumed two to three cups of coffee per day had approximately an 18 percent lower risk death during follow-up compared to those who reported drinking no coffee, she said. Drinking up to five cups per day, or 400 milligrams of caffeine per day, is not associated with any long-term health risks, Loftfield added.

Moderate caffeine intake, up to 200 milligrams per day, is even safe for pregnant women, according to a statement by the American College of Obstetricians and Gynecologists.

“There is an accumulating number of studies of very high quality that show that people who drink more coffee tend to have better health outcomes,” said Dr. Marc J. Gunter of Imperial College London, who was not part of the new study.

“Coffee drinking is correlated with other health behaviors,” and those who drink it regularly may have other healthy habits, like exercising and keeping to a healthier diet, though the researchers tried to account for those other factors, Gunter told Reuters Health.

The study doesn’t prove that coffee extends life.

“You could argue that people who are already sick might not be drinking as much coffee,” Gunter said.

But coffee may also have a direct effect on inflammation or cardiovascular health, he said.

“It doesn’t seem to do you any harm, if you like drinking coffee then carry on,” Gunter said.

Coffee can be part of a healthy, balanced lifestyle, and it may even do some good, though we can’t yet recommend than non-drinkers adopt the habit for health reasons, he said.

Gender Related Secret to Longevity in Stem Cells

Human supercentenarians share at least one thing in common–over 95 percent are women. Scientists have long observed differences between the sexes when it comes to aging, but there is no clear explanation for why females live longer. In a discussion of what we know about stem cell behavior and sex, Stanford University researchers Ben Dulken and Anne Brunet argue that it’s time to look at differences in regenerative decline between men and women. This line of research could open up new explanations for how the sex hormones estrogen and testosterone, or other factors, modify lifespan.

It’s known that estrogen has direct effects on stem cell populations in female mice, from increasing the number of blood stem cells (which is very helpful during pregnancy) to enhancing the regenerative capacity of brain stem cells at the height of estrus. Whether these changes have a direct impact on lifespan is what’s yet to be explored. Recent studies have already found that estrogen supplements increase the lifespan of male mice, and that human eunuchs live about 14 years longer than non-castrated males.

More work is also needed to understand how genetics impacts stem cell aging between the sexes. Scientists have seen that knocking out different genes in mice can add longevity benefits to one sex but not the other, and that males in twin studies have shorter telomeres–a sign of shorter cellular lifespan–compared to females.

“It is likely that sex plays a role in defining both lifespan and healthspan, and the effects of sex may not be identical for these two variables,” the authors write. “As the search continues for ways to ameliorate the aging process and maintain the regenerative capacity of stem cells, let us not forget one of the most effective aging modifiers: sex.”

Hugs Reduce Effects of Stress

Instead of an apple, could a hug-a-day keep the doctor away? According to new research from Carnegie Mellon University, that may not be that far-fetched of an idea.

Led by Sheldon Cohen, the Robert E. Doherty University Professor of Psychology in CMU’s Dietrich College of Humanities and Social Sciences, the researchers tested whether hugs act as a form of social support, protecting stressed people from getting sick. Published in Psychological Science, they found that greater social support and more frequent hugs protected people from the increased susceptibility to infection associated with being stressed and resulted in less severe illness symptoms.

Cohen and his team chose to study hugging as an example of social support because hugs are typically a marker of having a more intimate and close relationship with another person.

“We know that people experiencing ongoing conflicts with others are less able to fight off cold viruses. We also know that people who report having social support are partly protected from the effects of stress on psychological states, such as depression and anxiety,” said Cohen. “We tested whether perceptions of social support are equally effective in protecting us from stress-induced susceptibility to infection and also whether receiving hugs might partially account for those feelings of support and themselves protect a person against infection.”

In 404 healthy adults, perceived support was assessed by a questionnaire, and frequencies of interpersonal conflicts and receiving hugs were derived from telephone interviews conducted on 14 consecutive evenings. Then, the participants were intentionally exposed to a common cold virus and monitored in quarantine to assess infection and signs of illness.

The results showed that perceived social support reduced the risk of infection associated with experiencing conflicts. Hugs were responsible for one-third of the protective effect of social support. Among infected participants, greater perceived social support and more frequent hugs both resulted in less severe illness symptoms whether or not they experienced conflicts.

“This suggests that being hugged by a trusted person may act as an effective means of conveying support and that increasing the frequency of hugs might be an effective means of reducing the deleterious effects of stress,” Cohen said. “The apparent protective effect of hugs may be attributable to the physical contact itself or to hugging being a behavioral indicator of support and intimacy.”

Cohen added, “Either way, those who receive more hugs are somewhat more protected from infection.”

Extreme Longevity Genes Discovered

Centenarians show successful aging as they remain active and alert at very old ages. Scientists at Stanford University and the University of Bologna have begun to unravel the basis for longevity by finding genetic loci associated with extreme longevity.

Previous work indicated that centenarians have factors in their genetic make-up that contribute to successful aging. However, prior genetic studies have identified only a single gene APOE that was different in centenarians versus normal agers. The results from the current study indicate that several disease variants may be absent in centenarians versus the general population.

The report by Kristen Fortney and colleagues, published in PLOS Genetics, is an example of using Big Data to glean information about an extremely complicated trait such as longevity. To find the longevity genes, the authors first derived a new statistical method (termed ‘informed GWAS’) that takes advantage of knowledge from fourteen diseases to narrow the search genes associated with longevity. Using iGWAS, the scientists found five longevity loci that provide clues about physiological mechanisms for successful aging. These loci are known to be involved in various processes including cell senescence, autoimmunity and cell signaling, and also with Alzheimer’s disease.

The incidence of nearly all diseases increases with age, so understanding genetic factors for successful aging could have a large impact on health. Future work may lead to a better understanding of how these genes promote successful aging. Also, future studies could identify additional longevity genes by recruiting more centenarians for analysis.

Reference:

1.Kristen Fortney, Edgar Dobriban, Paolo Garagnani, Chiara Pirazzini, Daniela Monti, Daniela Mari, Gil Atzmon, Nir Barzilai, Claudio Franceschi, Art B. Owen, Stuart K. Kim. Genome-Wide Scan Informed by Age-Related Disease Identifies Loci for Exceptional Human Longevity. PLOS Genetics, 2015; 11 (12): e1005728 DOI: 10.1371/journal.pgen.1005728

As Overweight Increases It Becomes Harder to Lose Weight

The fatter we are, the more our body appears to produce a protein that inhibits our ability to burn fat, suggests new research published in the journal Nature Communication. The findings may have implications for the treatment of obesity and other metabolic diseases.

Most of the fat cells in the body act to store excess energy and release it when needed but some types of fat cells, known as brown adipocytes, function primarily for a process known as thermogenesis, which generates heat to keep us warm. However, an international team of researchers from the Wellcome Trust-Medical Research Council Institute of Metabolic Sciences at the University of Cambridge, UK, and Toho University, Japan, have shown that a protein found in the body, known as sLR11, acts to suppress this process.

Researchers investigated why mice that lacked the gene for the production of this protein were far more resistant to weight gain. All mice — and, in fact, humans — increase their metabolic rate slightly when switched from a lower calorie diet to a higher calorie diet, but mice lacking the gene responded with a much greater increase, meaning that they were able to burn calories faster.

Further examinations revealed that in these mice, genes normally associated with brown adipose tissue were more active in white adipose tissue (which normally stores fat for energy release). In line with this observation, the mice themselves were indeed more thermogenic and had increased energy expenditure, particularly following high fat diet feeding.

The researchers were able to show that sLR11 binds to specific receptors on fat cells — in the same way that a key fits into a lock — to inhibit their ability to activate thermogenesis. In effect, sLR11 acts as a signal to increase the efficiency of fat to store energy and prevents excessive energy loss through unrestricted thermogenesis.

When the researchers examined levels of sLR11 in humans, they found that levels of the protein circulating in the blood correlated with total fat mass — in other words, the greater the levels of the protein, the higher the total fat mass. In addition, when obese patients underwent bariatric surgery, their degree of postoperative weight loss was directly proportional to the reduction in their sLR11 levels, suggesting that sLR11 is produced by fat cells.

In their paper the authors suggest that sLR11 helps fat cells resist burning too much fat during ‘spikes’ in other metabolic signals following large meals or short term drops in temperature. This in turn makes adipose tissue more effective at storing energy over long periods of time.

There is growing interest in targeting thermogenesis with drugs in order to treat obesity, diabetes and other associated conditions such as heart disease. This is because it offers a mechanism for disposing of excess fat in a relatively safe manner. A number of molecules have already been identified that can increase thermogenesis and/or the number of fat cells capable of thermogenesis. However to date there have been very few molecules identified that can decrease thermogenesis.

These findings shed light on one of the mechanisms that the body employs to hold onto stored energy, where sLR11 levels increase in line with the amount of stored fat and act to prevent it being ‘wasted’ for thermogenesis.

Dr Andrew Whittle, joint first author, said: “Our discovery may help explain why overweight individuals find it incredibly hard to lose weight. Their stored fat is actively fighting against their efforts to burn it off at the molecular level.”

Professor Toni Vidal-Puig, who led the team, added: “We have found an important mechanism that could be targeted not just to help increase people’s ability to burn fat, but also help people with conditions where saving energy is important such as anorexia nervosa.”

Jeremy Pearson, Associate Medical Director at the British Heart Foundation (BHF), which helped fund the research, said: “This research could stimulate the development of new drugs that either help reduce obesity, by blocking the action of this protein, or control weight loss by mimicking its action. Based on this promising discovery, we look forward to the Cambridge team’s future findings.

“But an effective medicine to treat obesity, which safely manages weight loss is still some way off. In the meantime people can find advice on healthy ways to lose weight and boost their heart healthy on the BHF website — bhf.org.uk.”

Reference:

Andrew J. Whittle, Meizi Jiang, Vivian Peirce, Joana Relat, Sam Virtue, Hiroyuki Ebinuma, Isamu Fukamachi, Takashi Yamaguchi, Mao Takahashi, Takeyoshi Murano, Ichiro Tatsuno, Masahiro Takeuchi, Chiaki Nakaseko, Wenlong Jin, Zhehu Jin, Mark Campbell, Wolfgang J. Schneider, Antonio Vidal-Puig, Hideaki Bujo. Soluble LR11/SorLA represses thermogenesis in adipose tissue and correlates with BMI in humans. Nature Communications, 2015; 6: 8951 DOI: 10.1038/ncomms9951

How to Improve Sleep

As we age, we typically experience declines in the quality of our sleep. Mindfulness meditation is a self-administered approach that intentionally focuses one’s attention on the emotions, thoughts and sensations occurring in the present moment. David Black, from University of Southern California (California, USA), and colleagues enrolled 49 men and women, ages 55 years and older, whoe experienced moderately (or greater) disturbed sleep, who were divided into two groups. One group visited the study center for six weekly two-hour sessions of a course in Mindfulness Awareness Practices for daily living. Those included meditation, eating, walking, movement and friendly or loving-kindness practices. A certified teacher led the exercises and also instructed participants to meditate for five minutes daily, gradually increasing to 20 minutes daily. The other group attended six weeks of a sleep hygiene and education course, where they learned about sleep problems, and self-care methods for improving sleep, and weekly behavioral sleep hygiene strategies. Prior to the start of the six-week programs, the average sleep quality questionnaire score was 10. At the end of the study period, those in the meditation group demonstrated improvement in their sleep score by an average of 2.8 points, compared to 1.1 points in the sleep hygiene group. Among those in the meditation group, daytime impairments, including symptoms of insomnia, fatigue and depression, were improved as well. The study authors conclude that: “Formalized mindfulness-based interventions have clinical importance by possibly serving to remediate sleep problems among older adults in the short term, and this effect appears to carry over into reducing sleep-related daytime impairment that has implications for quality of life.”

Reference:

David S. Black, PhD, MPH1; Gillian A. O?Reilly, BS1; Richard Olmstead, PhD2; Elizabeth C. Breen, PhD2; Michael R. Irwin, MD2. Mindfulness Meditation and Improvement in Sleep Quality and Daytime Impairment Among Older Adults With Sleep Disturbances

Life Extension Genes Discovered

Out of a ‘haystack’ of 40,000 genes from three different organisms, scientists at ETH Zurich and a research consortium in Jena have found genes that are involved in physical ageing. If you influence only one of these genes, the healthy lifespan of laboratory animals is extended and possibly that of humans, too.

With advancements in molecular genetic methods in recent decades, the search for the genes involved in the aging process has greatly accelerated. Until now, this was mostly limited to genes of individual model organisms such as the C. elegans nematode, which revealed that around one percent of its genes could influence life expectancy. However, researchers have long assumed that such genes arose in the course of evolution and in all living beings whose cells have a preserved a nucleus from yeast to humans.

Combing through 40,000 genes

Researchers at ETH Zurich and the JenAge consortium from Jena have now systematically gone through the genomes of three different organisms in search of the genes associated with the aging process that are present in all three species and thus derived from the genes of a common ancestor. Although they are found in different organisms, these so-called orthologous genes are closely related to each other, and they are all found in humans, too.

In order to detect these genes, the researchers examined around 40,000 genes in the nematode C. elegans, zebra fish and mice. By screening them, the scientists wanted to determine which genes are regulated in an identical manner in all three organisms in each comparable aging stage young, mature and old; i.e. either are they upregulated or downregulated during aging.

As a measure of gene activity, the researchers measured the amount of messenger RNA (mRNA) molecules found in the cells of these animals. mRNA is the transcript of a gene and the blueprint of a protein. When there are many copies of an mRNA of a specific gene, it is very active; the gene is upregulated. Fewer mRNA copies, to the contrary, are regarded as a sign of low activity, explains Professor Michael Ristow, coordinating author of the recently published study and Professor of Energy Metabolism at ETH Zurich.

Out of this volume of information, the researchers used statistical models to establish an intersection of genes that were regulated in the same manner in the worms, fish and mice. This showed that the three organisms have only 30 genes in common that significantly influence the aging process.

Reduce gene activity, live longer

By conducting experiments in which the mRNA of the corresponding genes were selectively blocked, the researchers pinpointed their effect on the aging process in nematodes. With a dozen of these genes, blocking them extended the lifespan by at least five percent.

One of these genes proved to be particularly influential: the bcat-1 gene. “When we blocked the effect of this gene, it significantly extended the mean lifespan of the nematode by up to 25 percent,” says Ristow.

The researchers were also able to explain how this gene works: the bcat-1 gene carries the code for the enzyme of the same name, which degrades so-called branched-chain amino acids. Naturally occurring in food protein building blocks, these include the amino acids L-leucine, L-isoleucine and L-valine.

When the researchers inhibited the gene activity of bcat-1, the branched-chain amino acids accumulated in the tissue, triggering a molecular signalling cascade that increased longevity in the nematodes. Moreover, the timespan during which the worms remained healthy was extended. As a measure of vitality, the researchers measured the accumulation of aging pigments, the speed at which the creatures moved, and how often the nematodes successfully reproduced. All of these parameters improved when the scientists inhibited the activity of the bcat-1 gene.

The scientists also achieved a life-extending effect when they mixed the three branched-chain amino acids into the nematodes’ food. However, the effect was generally less pronounced because the bcat-1 gene was still active, which meant that the amino acids continued to be degraded and their life-extending effects could not develop as effectively.

Conserved mechanism

Ristow has no doubt that the same mechanism occurs in humans. “We looked only for the genes that are conserved in evolution and therefore exist in all organisms, including humans,” he says.

In the present study, he and his Jena colleagues from the Leibniz Institute on Aging, the Leibniz Institute for Natural Product Research and Infection Biology, the Jena University Hospital and the Friedrich Schiller University purposefully opted not to study the impact on humans. But a follow-up study is already being planned. “However we cannot measure the life expectancy of humans for obvious reasons,” says the ETH professor. Instead, the researchers plan to incorporate various health parameters such as cholesterol or blood sugar levels in their study to obtain indicators on the health status of their subjects.

Health costs could be massively reduced

Ristow says that the multiple branched-chain amino acids are already being used to treat liver damage and are also added to sport nutrition products. “However, the point is not for people to grow even older, but rather to stay healthy for longer,” says the internist. The study will deliver important indicators on how the aging process could be influenced and how age-related diseases such as diabetes or high blood pressure could be prevented. In light of unfavourable demographics and steadily increasing life expectancy, it is important to extend the healthy life phase and not to reach an even higher age that is characterised by chronic diseases, argue the researchers. With such preventive measures, an elderly person could greatly improve their quality of life while at the same time cutting their healthcare costs by more than half.

Blood and Aging

We have all heard those particularly haunting tales about witches remaining ever youthful by imbibing a young woman?s blood, but until a few years ago these tales were only told to frighten children before bed. Last year, SAGE reported on a study where the blood of a young mouse was sufficient to rejuvenate an older mouse. This study lent credence to the idea that there must be something substantially different in young blood compared to old.

To examine the changes that occur in blood as an individual ages, Dr. Andrew Johnson?s lab, at NIH/NHLBI (National Institute of Health/National Heart, Lung and Blood Institute) conducted an extensive study using thousands of patient blood samples, the study was then replicated, further verifying the results.

The researchers chose to analyze the blood samples transcriptome, a measurement of the RNA transcripts from each gene. The compilation of RNA transcripts is a reflection of the relative expression levels of the genome at a given point in time. The choice to examine the transcriptome was pivotal, as all the cells in an organism will have the same DNA and this DNA does not generally change during the person?s lifetime, thus making DNA genomic analysis less useful for an age-related study. What does change over a person?s lifetime is modifications of DNA, which genes are expressed from the DNA and the relative levels of expression of each gene.

The study, which has been published in Nature Communications, used certain types of blood cells and brain tissue to examine the age-associated changes in gene expression. In a remarkable show of replication, the study was initially performed with blood samples from individuals of European ancestry and then replicated in additional European ancestry samples, totaling an amazing 14,983 individual European ancestry samples. The study was then extended to various ethnic groups, including samples from individuals of Hispanic, African, or Native American ancestry. The study identified 1,497 genes in blood cells and/or brain tissue that showed significantly differential expression patterns in older individuals when compared to younger individuals.

The expression of the gene can either be negatively correlated (expressed at a lower level) or positively correlated (expressed at a higher level) in relation to chronological age. There were three distinct groups of genes that were negatively correlated with chronological age. The first group included three subgroups: ribosomal genes (factories on which a RNA is translated into a protein), mitochondrial genes (energy factories of the cells), and genes associated with DNA replication and repair (DNA maintenance and fidelity). All of the genes associated with these subgroups are vitally important to the health of a cell and tissue. The second large group consisted of genes associated with immunity. The third large group was composed of genes that code for the actual ribosomal subunits. Decreased gene expression could help explain the decreased ?health? of older cells and increased mutation rates in older cells. There were also four groups of genes positively correlated with age, which were focused on cellular structure, immunity, fatty acid metabolism, and lysosome activity. Several of the genes in these clusters had been previously identified in other age-related screens in various model organisms, further supporting this study?s methods and findings.

Another interesting finding in this study involved epigenetic patterns, specifically methylation on cytosines (one of the four nucleotide bases in DNA) and the predictive. Epigenetics can be thought of as the ?grammar? of DNA, as it doesn?t change the underlying pattern of DNA base pairs, but rather instructs how a gene is to be expressed. Methylation on cytosines is an epigenetic mark that can have a regulatory effect on how or if a gene is expressed. Methylation patterns are also dynamic, meaning that this pattern can change over time. This study showed that those genes whose expression pattern changed with age were highly enriched for the presence of regulatory cytosines. This could indicate how gene expression is controlled as the individual ages. There are several targeted methylation therapies in development that might potentially offer the ability to effectively and safely alter these methylation patterns for therapeutic purposes. The authors found that by combining the transcriptomic expression patterns and the epigenetic patterns a ?chronological? age predictor could be used to better understand an individual?s ?age? in terms of health. Further refinement is needed, but this type of predictor could have a substantial impact on prediction, diagnosis and treatment of individuals, perhaps even allowing for preventive treatments before symptoms progress to disease level changes.

The sheer magnitude of this study, from the number of samples to the ethnic diversity of the participants, makes it a pioneer in the rapidly expanding field of transcriptomics. Until a few years ago, the methods and budgets did not exist for such a study to take place, but as the technology continues to increase, costs decline and more data will become available, enhancing our understanding of aging and allowing for us to better cope with age-associated changes. The 1,497 genes identified as being associated with chronological age offer a plethora of new targets from which we can better understand the aging process and age-related diseases. With the current progress being made in the gene therapy and drug fields it is possible that some of these 1,497 genes could potentially be manipulated to ameliorate many age-related diseases.